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Chapter 3
Biotransformations
Outline
3.1 Introduction
3.1 Introduction
Biocatalysis: transformations involving isolated enzymes Biotransformations: procedures involving whole cells
3.1 Introduction
isolated enzymes resting whole cells dead microorganism immobilised enzymes or cells
3.1 Introduction
Biotransformation: the process whereby a substance is converted into a product in a limited number of enzymatic steps by the use of biological catalysts.
3.1 Introduction
Synthesis of chiral compounds Reversal of hydrolytic reactions Complex synthetic reactions, such as aromatic hydroxylations and enzymatic group protection chemistry
3.1 Introduction
energy effective catalysts working at moderate temperatures, perssures and pH values safe and environmentally friendly
3.1 Introduction
3.1 Introduction
It is necessary to select the appropriate biocatalyst with suitable activity, selectivity and stability.
screening for novel biocatalysts
Strategies
Selection of new micro-organisms with novel activities is still worthwhile taking into account the overwhelming biochemical diversity present in nature. One gram of soil may contain up to 4000 different species, however, current estimates indicate that less than 1% of these organisms have been isolated.
Metagenome approach involved in techniques to directly extract, clone and recombinantly express genomic DNA from entire uncultivated microbial communities provides genetic access to the uncultured majority of microbial diversity and its enzymatic constituents, and serve as a rich source for isolation of novel biocatalysts.
cheap, simple, rapid and selective detection methods, perferably capable of some automation, are required.
A well-known way to accomplish a desired biotransformation is the use of existing biocatalysts on natural and unnatural substrates. The exploitation of existing biocatalysts under different reaction conditions could lead to the finding of a biocatalyst for the desired biotransformation.
Control of biocatalyst micro- Manipulation of biocatalyst activity and specificity environment Stabilisation of biocatalyst activity Protection of shear-sensitive biocatalysts Facilitated separation of the Precise control of bioreaction time biocatalyst from the product Minimisation of further product transformation
Immobilized enzymes
Adsorption:
enzymes are added to porous polymer matrix and adsorbed to the internal surfaces through different interactions (charge, hydrostatic, etc.)
Covalent Binding:
enzymes are added to porous matrix and covalently linked to the matrix
Membrane retention:
enzymes are either entrapped in one compartment and retained in the reactor be selection of the pore size of the membrane, or enzymes are covalently bound to the membrane.
Methods of immobilization
dextrins
glucose
Invert suger from sucrose as well as for the isomerization of glucase to fructose.
L-amino acids: produced by using chemical and biosynthetic methods: Chemical synthesis: a racemic mixture of the L- and Disomers; Biosynthetic methods: specifically produced.
L-amino acids: hydrolysis of proteins with proteases and peptidases.
malic acid
Leuconostoc
lactic acid
oxidate sulfites
innocuous sulfates
In the pharmaceutical industry, many chemical transformation are carried out by biocatalysts, such as
Questions
1. What is biotransformation? 2. Describe the biotransformation process? 3. What is the advantages of biotransformations and biocatalysis? 4. List three strategies for biocatalyst selection? 5. Why and how is biocatalyst immobilized? 6. List several examples of industrial enzyme biocatalysis process?
Colin Ratledge, Bjrn Kristiansen. Basic Biotechnology (Second Edition) 2003. . Liese A, Seelbach K, Wandrey CIndustrial Biotransformations2008. . 2006. Schmid A, Dordick JS, Hauer B, Kiener A, Wubbolts M, Witholt B. Industrial biocatalysis today and tomorrow. Nature, 2001, 409, 258-266 Lorenz P, Eck J. Screening for novel industrial biocatalysts. Eng. Life Sci., 2004, 4(6), 501-504. Zeyaullah Md, Kamli MR, Islam B, Atif M, Benkhayal FA, Nehal M, Rizvi MA, Ali A. Metagenomics-An advanced approach for non-cultivable micro-organisms. Biotechnology and Molecular Biology Reviews, 2009, 4(3): 49-54.