Professional Documents
Culture Documents
Acid
Dr. Asep
Sudarman
OVERVIEW OF AMINO ACID
METABOLISM
ENVIRONMENT ORGANIS
M
Bio-
Ingeste synthesi Protein
d s
2 3
protein 1
a
AM IN
O b
c ACIDS c
Purines
Degradatio
n
Pyrimidine
Carbo s
Nitrogen (required)
skeletons
n Porphyrins
(glucogeni
(ketogenic)
Ure Used c)
energ
a acetoacetat fory pyruvate
e acetyl α-
CoA ketoglutarate
succinyl-CoA
fumarate
oxaloacetate
Amino Acid
Metabolism
•Metabolism of the 20 common amino acids is
considered from the origins and fates of
their:
(1) Nitrogen atoms
(2) Carbon skeletons
•For mammals:
Essential amino acids must be obtained
from diet
Nonessential amino acids - can be
synthesized
Amino Acid Requirements of Humans
------------------------------------------------------------------
--
Nutritionally Essential Nutritionally Nonessential
Argininea Alanine
------------------------------------------------------------------
-- Histidine Asparagine
Isoleucine Aspartate
Leucine Cysteine
Lysine Glutamate
Methionine Glutamine
Phenylalanine Glycine
Threonine Proline
Tryptophan Serine
Valine Tyrosine
--------------------------------------------------------------------
-
a “
Nutritionally semiessential.” Synthesized at
rates inadequate to support growth of children.
AMINO ACID
METABOLISM
• KETOGENI
C
– LEU
– LYS
• GLUCOGENIC
ALL NON- + HIS, VAL, MET
ESSENTIALS
• BOTH
– ILE
– PH
E
– TH
R
– TRP
– TYR
AMINO ACID
•
BIOSYNTHESIS
ALL ARE SYNTHESIZED FROM COMMON
METABOLIC INTERMEDIATES
• NON-ESSENTIAL
– TRANSAMINATION OF -KETOACIDS THAT ARE AVAILABLE
AS COMMON INTERMEDIATES
• ESSENTIAL
– THEIR -KETOACIDS ARE NOT COMMON INTERMEDIATES
(ENZYMES NEEDEDTO FORM THEM ARE LACKING)
• SO TRANSAMINATION ISN’T AN OPTION
– BUT THEYARE PRESENT IN COMMON PATHWAYS OF MICRO-
ORGANISMS AND PLANTS
AMINO ACID
BIOSYNTHESIS OVERVIEW
(USE OF COMMON
INTERMEDIATES)
Overview
(cont) Pyruvat
e
Biosynthetic
Families
Metabolic Precursors Amino
Acids
- Glutamat
ketoglutarate e
Glutamine
Proline
Arginine
3- Serine
Phophoglycerate Glycine
Cystein
e
Biosynthetic Families
(cont)
Metabolic Precursors Amino
Acids
Oxaloacetat Aspartate, Asparagine
e Methionine,
Threonine, Lysine
Glutamate
Glutamate
Serine
Glycine Cysteine
Synthesis of Serine and
Glycine
Synthesis of
Cysteine
Oxoloacetate
Family
Oxaloacetate
Aspartate
Asparagin
e
Pyruvate
Family
Pyruvate
Phosphoenolpyruvate
+
erythrose 4-phosphate
Chorismate
By convention, peptide
sequences are written left to
right from the N-terminus to the
C-terminus
backbone